Detection and identification of human parainfluenza viruses 1, 2, 3, and 4 in clinical samples of pediatric patients by multiplex reverse transcription-PCR

J Clin Microbiol. 2000 Mar;38(3):1191-5. doi: 10.1128/JCM.38.3.1191-1195.2000.

Abstract

We describe a multiplex reverse transcription-PCR (m-RT-PCR) assay that is able to detect and differentiate all known human parainfluenza viruses (HPIVs). Serial dilution experiments with reference strains that compared cell culture isolation and m-RT-PCR showed sensitivities ranging from 0.0004 50% tissue culture infective dose (TCID(50)) for HPIV type 4B (HPIV-4B) to 32 TCID(50)s for HPIV-3. As few as 10 plasmids containing HPIV PCR products could be detected in all cases. When 201 nasopharyngeal aspirate specimens from pediatric patients hospitalized for lower respiratory illness were tested, m-RT-PCR assay detected 64 HPIVs (24 HPIV-3, 23 HPIV-1, 10 HPIV-4, and 7 HPIV-2), while only 42 of them (21 HPIV-1, 14 HPIV-3, 6 HPIV-2, and 1 HPIV-4 isolates) grew in cell culture. Our m-RT-PCR assay was more sensitive than either cell culture isolation or indirect immunofluorescence with monoclonal antibodies for the detection of HPIV infections. Also, HPIV-4 was more frequently detected than HPIV-2 in this study, suggesting that it may have been underestimated as a lower respiratory tract pathogen because of the insensitivity of cell culture.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Child
  • DNA Primers
  • DNA, Viral / isolation & purification
  • Dogs
  • Fluorescent Antibody Technique, Indirect
  • Humans
  • Inhalation
  • Parainfluenza Virus 1, Human / isolation & purification*
  • Parainfluenza Virus 2, Human / isolation & purification*
  • Parainfluenza Virus 3, Human / isolation & purification*
  • Respirovirus Infections / diagnosis*
  • Retrospective Studies
  • Reverse Transcriptase Polymerase Chain Reaction / methods
  • Rubulavirus / isolation & purification*
  • Rubulavirus Infections / diagnosis*
  • Sensitivity and Specificity
  • Tumor Cells, Cultured

Substances

  • DNA Primers
  • DNA, Viral