Crystallization and preliminary X-ray analysis of the C/EBPbeta C-terminal region in complex with DNA

Acta Crystallogr D Biol Crystallogr. 2001 Jun;57(Pt 6):854-6. doi: 10.1107/s0907444901003912. Epub 2001 May 25.

Abstract

The C-terminal fragment (residues 259-345) of human C/EBPbeta, a basic region leucine zipper transcriptional regulatory factor which includes the minimal DNA-binding domain, was crystallized in complex with a 16 bp DNA fragment from the tom-1 promoter. The crystals were in the form of a parallelepiped belonging to space group C222(1), had unit-cell parameters a = 100.7 (2), b = 113.5 (1), c = 74.4 (1) A and diffracted to a resolution of 2.1 A. Moreover, truncation of nine residues from the C-terminus not conserved among C/EBP family members yielded isomorphous crystals that diffracted to a resolution of 1.8 A or better. Truncation of 14 residues from the N-terminus of the C-terminal fragment produced well shaped crystals in the form of hexagonal bipyramids, however; unfortunately, they were unstable and diffracted poorly.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • CCAAT-Enhancer-Binding Protein-beta / chemistry*
  • CCAAT-Enhancer-Binding Protein-beta / genetics
  • Crystallization
  • Crystallography, X-Ray
  • DNA / chemistry*
  • Gene Deletion
  • Humans
  • Nucleic Acid Conformation
  • Protein Conformation

Substances

  • CCAAT-Enhancer-Binding Protein-beta
  • DNA