Comparison of arbitrarily primed-polymerase chain reaction and pulse-field gel electrophoresis for characterizing methicillin-resistant Staphylococcus aureus

Lett Appl Microbiol. 2002;35(1):62-7. doi: 10.1046/j.1472-765x.2002.01140.x.

Abstract

Aims: The aim of this study was to analyse genotypes for clinical isolates of methicillin-resistant Staphylococcus aureus (MRSA), including hetero-vancomycin-resistant Staph. aureus (VRSA), at a Japanese university hospital.

Methods and results: Seventy-eight clinical isolates of MRSA were analysed by arbitrarily primed-polymerase chain reaction (AP-PCR) using ERIC2 primer and by pulse-field gel electrophoresis (PFGE) following SmaI digestion. Analyses of the nine genotypes and 28 subtypes defined by PFGE, and of the three genotypes and 22 subtypes defined by AP-PCR, both facilitated epidemiological tracing. Used in combination, AP-PCR and PFGE provided more precise classification than the use of a single genotyping method. The six hetero-VRSA isolates were classified into four genotypes defined by the combination of both methods, but these genotypes contained non-VRSA isolates.

Conclusions: The results suggest that both PFGE and AP-PCR are useful in discriminating MRSA, but not hetero-VRSA, isolates for epidemiological analysis.

Significance and impact of the study: Combining the results of PFGE with the results of AP-PCR can provide more detail differentiation of MRSA and hetero-MRSA isolates than either method alone.

Publication types

  • Comparative Study

MeSH terms

  • DNA, Bacterial / analysis
  • Electrophoresis, Gel, Pulsed-Field / methods*
  • Genome, Bacterial
  • Genotype
  • Humans
  • Japan / epidemiology
  • Methicillin Resistance*
  • Polymerase Chain Reaction / methods*
  • Staphylococcus aureus / classification*
  • Staphylococcus aureus / drug effects
  • Staphylococcus aureus / genetics
  • Vancomycin Resistance

Substances

  • DNA, Bacterial