A circularly permuted myoglobin possesses a folded structure and ligand binding similar to those of the wild-type protein but with a reduced thermodynamic stability

Biochemistry. 2002 Nov 5;41(44):13318-27. doi: 10.1021/bi026404g.

Abstract

A circular permutein of sperm whale myoglobin in which the G helix is C-terminal, the H helix is N-terminal, and 16 amino acids link the H helix to the A helix has been expressed in Escherichia coli. The permutein sequence begins with Gly121 (using the numbering scheme for the wild-type protein) and terminates with Pro120. The ligand binding function of the permutein was assayed using stopped-flow methods and shown to be essentially identical to that of the wild-type protein. In addition, one- and two-dimensional NMR studies of the cyanomet isoform of the permutein show a nativelike structure with a heme binding pocket very similar to that of the wild-type myoglobin. Although the structure and function of the permutein resemble those of the wild-type myoglobin, the permutein is less stable to chemical denaturation by 5.2 kcal/mol.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Circular Dichroism
  • Escherichia coli / genetics
  • Ligands
  • Molecular Sequence Data
  • Myoglobin / chemistry*
  • Myoglobin / genetics
  • Myoglobin / isolation & purification
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Binding / genetics
  • Protein Denaturation
  • Protein Engineering / methods
  • Protein Folding*
  • Protein Structure, Secondary / genetics
  • Protein Structure, Tertiary / genetics
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / isolation & purification
  • Thermodynamics*
  • Urea
  • Whales

Substances

  • Ligands
  • Myoglobin
  • Recombinant Proteins
  • Urea