Abstract
The SHAPES strategy combines nuclear magnetic resonance (NMR) screening of a library of small drug-like molecules with a variety of complementary methods, such as virtual screening, high throughput enzymatic assays, combinatorial chemistry, X-ray crystallography, and molecular modeling, in a directed search for new medicinal chemistry leads. In the past few years, the SHAPES strategy has found widespread utility in pharmaceutical research. To illustrate a variety of different implementations of the method, we will focus in this review on recent applications of the SHAPES strategy in several drug discovery programs at Vertex Pharmaceuticals.
MeSH terms
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Binding Sites
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Carrier Proteins / chemistry
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Carrier Proteins / metabolism
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Combinatorial Chemistry Techniques*
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Drug Design*
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Fatty Acid-Binding Proteins
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JNK Mitogen-Activated Protein Kinases
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Ligands
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Mitogen-Activated Protein Kinases / chemistry
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Mitogen-Activated Protein Kinases / metabolism
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Models, Molecular
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Neoplasm Proteins*
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Nuclear Magnetic Resonance, Biomolecular / methods*
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RNA / chemistry
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RNA / metabolism
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Structure-Activity Relationship
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Technology, Pharmaceutical*
Substances
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Carrier Proteins
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Fatty Acid-Binding Proteins
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Ligands
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Neoplasm Proteins
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RNA
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JNK Mitogen-Activated Protein Kinases
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Mitogen-Activated Protein Kinases