Molecular cloning and sequence analysis of the gene coding for the 57-kDa major soluble antigen of the salmonid fish pathogen Renibacterium salmoninarum

FEMS Microbiol Lett. 1992 Sep 15;75(2-3):259-65. doi: 10.1016/0378-1097(92)90414-j.

Abstract

The complete sequence coding for the 57-kDa major soluble antigen of the salmonid fish pathogen, Renibacterium salmoninarum, was determined. The gene contained an opening reading frame of 1671 nucleotides coding for a protein of 557 amino acids with a calculated M(r) value of 57,190. The first 26 amino acids constituted a signal peptide. The deduced sequence for amino acid residues 27-61 was in agreement with the 35 N-terminal amino acid residues determined by microsequencing, suggesting the protein is synthesized as a 557-amino acid precursor and processed to produce a mature protein of M(r) 54,505. Two regions of the protein contained imperfect direct repeats. The first region contained two copies of an 81-residue repeat, the second contained five copies of an unrelated 25-residue repeat. Also, a perfect inverted repeat (including three in-frame UAA stop codons) was observed at the carboxyl-terminus of the gene.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antigens, Bacterial / genetics*
  • Bacteria / genetics*
  • Bacteria / immunology
  • Bacteria / pathogenicity
  • Base Sequence
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • Epitopes / genetics
  • Genes, Bacterial*
  • Molecular Sequence Data
  • Open Reading Frames
  • Repetitive Sequences, Nucleic Acid
  • Salmonidae / microbiology*
  • Virulence / genetics

Substances

  • Antigens, Bacterial
  • DNA, Bacterial
  • Epitopes

Associated data

  • GENBANK/S39996
  • GENBANK/S40001
  • GENBANK/S40008
  • GENBANK/S40009
  • GENBANK/S40010
  • GENBANK/S46736
  • GENBANK/S46737
  • GENBANK/S46738
  • GENBANK/S46917
  • GENBANK/X72580