Molecular evidence indicating that the yeast PAF complex is required for transcription elongation

EMBO Rep. 2004 Jan;5(1):47-53. doi: 10.1038/sj.embor.7400045.

Abstract

PAF is a five-subunit protein complex composed of Paf1, Cdc73, Leo1, Rtf1 and Ctr9, which was purified from yeast in association with RNA polymerase II and which is believed to function in transcription elongation. However, no direct proof exists for this yet. To assay whether PAF is required in elongation, we determined the in vitro transcription-elongation efficiencies of mutant cell extracts using a DNA template containing two G-less cassettes. paf1Delta or cdc73Delta cell extracts showed reduced transcription-elongation efficiencies (16-18% of the wild-type levels), whereas leo1Delta and rtf1Delta showed wild-type levels. In vivo transcription efficiency was diminished in the four mutants analysed, as determined by their abilities to transcribe lacZ. Our work provides molecular evidence that PAF has a positive role in transcription elongation and is composed of at least two functionally different types of subunits (Paf1-Cdc73 and Leo1-Rtf1).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carrier Proteins / genetics
  • Cell Cycle Proteins / genetics
  • Lac Operon
  • Nuclear Proteins / genetics
  • Peptide Chain Elongation, Translational*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics*
  • TATA-Box Binding Protein / genetics
  • Transcription Factors / genetics
  • Transcription, Genetic*
  • Transcriptional Elongation Factors

Substances

  • CDC73 protein, S cerevisiae
  • CTR9 protein, S cerevisiae
  • Carrier Proteins
  • Cell Cycle Proteins
  • Nuclear Proteins
  • PAF1 protein, S cerevisiae
  • POB3 protein, S cerevisiae
  • RTF1 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins
  • TATA-Box Binding Protein
  • Transcription Factors
  • Transcriptional Elongation Factors