Little is known about the neurodevelopmental nature of human cognitive abilities. This investigation presents evidence consistent with a hypothesis that interindividual and within-sex cognitive variations are associated with vulnerabilities to environmental sources of developmental stress. A large sample of healthy heterosexual and homosexual men and women (N=240) completed a series of visuospatial and verbal tests. A composite fluctuating asymmetry (FA) measure was computed from the lengths of the finger digits. In heterosexual men, higher FA scores were associated with poorer line orientation judgment; and in homosexual men, with poorer verbal fluency and perceptual speed. No associations were found in heterosexual or homosexual women. These results suggest that developmental instability is linked to neurocognitive integrity in men, but not in women.