Thermosiphon-based PCR reactor: experiment and modeling

Anal Chem. 2004 Jul 1;76(13):3707-15. doi: 10.1021/ac049914k.

Abstract

A self-actuated, flow-cycling polymerase chain reaction (PCR) reactor that takes advantage of buoyancy forces to continuously circulate reagents in a closed loop through various thermal zones has been constructed, tested, and modeled. The heating required for the PCR is advantageously used to induce fluid motion without the need for a pump. Flow velocities on the order of millimeters per second are readily attainable. In our preliminary prototype, we measured a cross-sectionally averaged velocity of 2.5 mm/s and a cycle time of 104 s. The flow velocity is nearly independent of the loop's length, making the device readily scalable. Successful amplifications of 700- and 305-bp fragments of Bacillus cereus genomic DNA have been demonstrated. Since the device does not require any moving parts, it is particularly suitable for miniature systems.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Bacillus cereus / genetics
  • DNA, Bacterial / analysis
  • Equipment Design
  • Heating
  • Polymerase Chain Reaction / instrumentation*
  • Polymerase Chain Reaction / methods
  • Sensitivity and Specificity
  • Surface Properties
  • Temperature*

Substances

  • DNA, Bacterial