Complex assembly, crystallization and preliminary X-ray crystallographic studies of MHC H-2Kd complexed with an HBV-core nonapeptide

Acta Crystallogr D Biol Crystallogr. 2004 Aug;60(Pt 8):1473-5. doi: 10.1107/S0907444904013587. Epub 2004 Jul 21.

Abstract

In order to establish a system for structural studies of the murine class I major histocompatibility antigen complex (MHC) H-2Kd, a bacterial expression system and in vitro refolding preparation of the complex of H-2Kd with human beta2m and the immunodominant peptide SYVNTNMGL from hepatitis B virus (HBV) core-protein residues 87-95 was employed. The complex (45 kDa) was crystallized; the crystals belong to space group P222(1), with unit-cell parameters a = 89.082, b = 110.398, c = 47.015 A, alpha = beta = gamma = 90 degrees. The crystals contain one complex per asymmetric unit and diffract X-rays to at least 2.06 A resolution. The structure has been solved by molecular replacement and is the first crystal structure of a peptide-H-2Kd complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Chromatography, Gel
  • Chromatography, Ion Exchange
  • Crystallization
  • Crystallography, X-Ray
  • H-2 Antigens / chemistry*
  • H-2 Antigens / immunology
  • H-2 Antigens / isolation & purification
  • H-2 Antigens / metabolism*
  • Hepatitis B virus / chemistry*
  • Hepatitis B virus / immunology
  • Humans
  • Mice
  • Peptide Fragments / chemistry*
  • Peptide Fragments / immunology
  • Peptide Fragments / isolation & purification
  • Peptide Fragments / metabolism*
  • Protein Binding
  • Protein Folding
  • Viral Core Proteins / chemistry*
  • Viral Core Proteins / immunology
  • Viral Core Proteins / isolation & purification
  • Viral Core Proteins / metabolism*
  • beta 2-Microglobulin / metabolism

Substances

  • H-2 Antigens
  • Peptide Fragments
  • Viral Core Proteins
  • beta 2-Microglobulin