Biochemical, biophysical and preliminary X-ray crystallographic analyses of the fusion core of Sendai virus F protein

Acta Crystallogr D Biol Crystallogr. 2004 Sep;60(Pt 9):1632-5. doi: 10.1107/S0907444904015872. Epub 2004 Aug 26.

Abstract

It is emerging that enveloped viruses may adopt a unique entry/fusion mechanism; in paramyxoviruses, including Sendai virus (SeV), the attachment protein HN (or its homologue H or G) binds a cellular receptor which triggers conformational changes of its fusion protein, F. There are at least three conformations of the F protein in the current fusion model: the pre-fusion native conformation, the pre-hairpin intermediate conformation and the post-fusion coiled-coil conformation. The fusion mechanism of SeV, a member of the Paramyxoviridae family, has been well established and several structural and functional domains or modules have been proposed from studies of its F protein. However, biochemical and biophysical studies of the heptad-repeat (HR) regions (HR1 and HR2) have not been systematically carried out. HR1 and HR2 strongly interact with each other to form a stable six-helix coiled-coil bundle as the post-fusion conformation. In this study, a single-chain HR1-linker-HR2 protein of SeV was prepared in an Escherichia coli expression system and biochemical and biophysical analyses showed it to form a typical six-helix coiled-coil bundle; its trigonal crystals diffracted X-rays to 2.5 A resolution. The crystal structure will help to reveal the structural requirements of the post-fusion coiled-coil conformation of SeV F protein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Biophysical Phenomena
  • Biophysics
  • Crystallization
  • Crystallography, X-Ray
  • Electrophoresis, Polyacrylamide Gel
  • Escherichia coli / metabolism
  • Mass Spectrometry
  • Molecular Sequence Data
  • Protein Structure, Secondary
  • Sendai virus / genetics
  • Sendai virus / metabolism
  • Viral Fusion Proteins / biosynthesis
  • Viral Fusion Proteins / chemistry*
  • Viral Fusion Proteins / genetics

Substances

  • Viral Fusion Proteins