Diversity of microorganisms within rock varnish in the Whipple Mountains, California

Appl Environ Microbiol. 2006 Feb;72(2):1708-15. doi: 10.1128/AEM.72.2.1708-1715.2006.

Abstract

Rock varnish from Arizona's Whipple Mountains harbors a microbial community containing about 10(8) microorganisms g(-1) of varnish. Analyses of varnish phospholipid fatty acids and rRNA gene libraries reveal a community comprised of mostly Proteobacteria but also including Actinobacteria, eukaryota, and a few members of the Archaea. Rock varnish represents a significant niche for microbial colonization.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Actinobacteria / classification
  • Actinobacteria / genetics
  • Actinobacteria / isolation & purification
  • Archaea / classification
  • Archaea / genetics
  • Archaea / isolation & purification
  • Biodiversity
  • California
  • Ecosystem*
  • Eukaryotic Cells
  • Geologic Sediments / microbiology*
  • Molecular Sequence Data
  • Phylogeny
  • Proteobacteria / classification
  • Proteobacteria / genetics
  • Proteobacteria / isolation & purification
  • RNA, Archaeal / genetics
  • RNA, Archaeal / isolation & purification
  • RNA, Bacterial / genetics
  • RNA, Bacterial / isolation & purification
  • RNA, Ribosomal, 16S / genetics
  • RNA, Ribosomal, 16S / isolation & purification

Substances

  • RNA, Archaeal
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AY923076
  • GENBANK/AY923077
  • GENBANK/AY923078
  • GENBANK/AY923079
  • GENBANK/AY923080
  • GENBANK/AY923081
  • GENBANK/AY923082
  • GENBANK/AY923083
  • GENBANK/AY923084
  • GENBANK/AY923085
  • GENBANK/AY923086
  • GENBANK/AY923087
  • GENBANK/AY923088
  • GENBANK/AY923089
  • GENBANK/AY923090
  • GENBANK/AY923091
  • GENBANK/AY923092
  • GENBANK/AY923093
  • GENBANK/AY923094
  • GENBANK/AY923095
  • GENBANK/AY923096
  • GENBANK/AY923097
  • GENBANK/AY923098
  • GENBANK/AY923099
  • GENBANK/AY923100
  • GENBANK/AY923101
  • GENBANK/AY923102
  • GENBANK/AY923105
  • GENBANK/AY923106