Cloning, expression, and mapping of GDP-D-mannose pyrophosphorylase cDNA from tomato (Lycopersicon esculentum)

Yi Chuan Xue Bao. 2006 Aug;33(8):757-64. doi: 10.1016/S0379-4172(06)60108-X.

Abstract

GDP-D-mannose pyrophosphorylase (GMP, EC 2.7.7.22) catalyzes the synthesis of GDP-D-mannose and represents the first committed step in plant ascorbic acid biosynthesis. Using potato GMP cDNA sequence as a querying probe, 65 highly homologous tomato ESTs were obtained from dbEST of GenBank and the putative cDNA sequence of tomato GMP was assembled. The full-length GMP cDNA of tomato was cloned by RACE-PCR with primers designed according to the assembled cDNA sequence. The full-length cDNA sequence contained a complete open reading frame (ORF) of 1,086 bp, which encoded 361 amino acid residues. This gene was designated as LeGMP (GenBank accession No. AY605668). Homology analysis of LeGMP showed a 96% identity with potato GMP and the deduced amino acid showed 99%, 97%, 91% and 89% homology with GMP from potato, tobacco, alfalfa and Arabidopsis thaliana, respectively. Northern blot analysis showed that LeGMP was constitutively expressed in roots, stems, leaves, flowers and fruits of tomato; but the expression levels varied. LeGMP was mapped to 3-D using 75 tomato introgression lines (ILs), each containing a single homozygous RFLP-defined chromosome segment from the green-fruited species Lycopersicon pennellii.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cloning, Molecular
  • DNA, Complementary / genetics*
  • DNA, Complementary / metabolism
  • Gene Expression
  • Molecular Sequence Data
  • Nucleotidyltransferases / genetics*
  • Nucleotidyltransferases / metabolism
  • Sequence Alignment
  • Solanum lycopersicum / enzymology
  • Solanum lycopersicum / genetics*
  • Solanum tuberosum / enzymology
  • Solanum tuberosum / genetics

Substances

  • DNA, Complementary
  • Nucleotidyltransferases
  • mannose 1-phosphate guanylyltransferase

Associated data

  • GENBANK/AY605668