[Evaluation of two techniques of molecular subtyping to study Pasteurella multocida]

Rev Argent Microbiol. 2006 Oct-Dec;38(4):190-6.
[Article in Spanish]

Abstract

Typeability, reproducibility, and discriminatory power of ERIC-PCR and Apal-PFGE to establish the genetic relation of P. multocida strains were determined. Forty-nine strains of different source, biotype, capsular group, somatic serotype, and resistance to antimicrobials were studied. By ERIC-PCR, 31 patterns were defined with 10 to 14 bands in a rank of 0.2 and 1.2 kb. By Apal-PFGE, 37 restriction patterns were established with 7 to 15 bands of 34 to 450 kb. Typeability was 100% (T=1) for ERIC-PCR, and 94% (T = 0.94) for Apal-PFGE. Reproducibility of both techniques was 100% (R=1). Discriminatory power was 93% (D = 0.93) for ERIC-PCR, and 98% (D = 0.98) for Apal-PFGE. By using both techniques, epidemiologically related strains were grouped, and unrelated strains were clearly differentiated. The value of ERIC-PCR and Apal-PFGE as complements to epidemiologic studies was demonstrated, especially when both techniques were used to analyze the strains.

Publication types

  • Comparative Study
  • Evaluation Study

MeSH terms

  • Americas
  • Animals
  • Antarctic Regions
  • Australia
  • Bird Diseases / microbiology
  • Birds / microbiology
  • Cattle / microbiology
  • Cattle Diseases / microbiology
  • Chickens / microbiology
  • DNA, Bacterial / genetics
  • Deoxyribonucleases, Type II Site-Specific
  • Drug Resistance, Bacterial
  • Electrophoresis, Gel, Pulsed-Field / methods*
  • Humans
  • Pasteurella Infections / microbiology
  • Pasteurella Infections / veterinary
  • Pasteurella multocida / classification*
  • Pasteurella multocida / genetics
  • Pasteurella multocida / isolation & purification
  • Polymerase Chain Reaction / methods*
  • Polymorphism, Restriction Fragment Length*
  • Poultry Diseases / microbiology
  • Reproducibility of Results
  • Swine / microbiology
  • Swine Diseases / microbiology
  • Turkeys / microbiology

Substances

  • DNA, Bacterial
  • Deoxyribonucleases, Type II Site-Specific
  • GGGCCC-specific type II deoxyribonucleases