Crystallization and preliminary crystallographic analysis of a haloalkane dehalogenase, DbjA, from Bradyrhizobium japonicum USDA110

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Apr 1;63(Pt 4):294-6. doi: 10.1107/S1744309107008652. Epub 2007 Mar 12.

Abstract

Haloalkane dehalogenases are key enzymes for the degradation of halogenated aliphatic pollutants. The haloalkane dehalogenase DbjA constitutes a novel substrate-specificity class with high catalytic activity for beta-methylated haloalkanes. In order to reveal the mechanism of its substrate specificity, DbjA has been crystallized using the hanging-drop vapour-diffusion method. The best crystals were obtained using the microseeding technique with a reservoir solution consisting of 17-19.5%(w/v) PEG 4000, 0.2 M calcium acetate and 0.1 M Tris-HCl pH 7.7-8.0. The space group of the DbjA crystal is P2(1)2(1)2, with unit-cell parameters a = 212.9, b = 117.8, c = 55.8 A. The crystal diffracts to 1.75 A resolution.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bradyrhizobium / enzymology*
  • Crystallization
  • Crystallography, X-Ray
  • Escherichia coli / genetics
  • Hydrolases / chemistry*
  • Hydrolases / genetics
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics

Substances

  • Recombinant Proteins
  • Hydrolases
  • haloalkane dehalogenase