The RNA binding protein hnRNP Q modulates the utilization of exon 7 in the survival motor neuron 2 (SMN2) gene

Mol Cell Biol. 2008 Nov;28(22):6929-38. doi: 10.1128/MCB.01332-08. Epub 2008 Sep 15.

Abstract

Spinal muscular atrophy (SMA) is a recessive neuromuscular disorder caused by the homozygous loss of the SMN1 gene. The human SMN2 gene has a C-to-T transition at position +6 of exon 7 and thus produces exon 7-skipping mRNAs. However, we observed an unexpectedly high level of exon 7-containing SMN2 transcripts as well as SMN protein in testis of smn(-/-) SMN2 transgenic mice. Using affinity chromatography, we identified several SMN RNA-associating proteins in mouse testis and human HeLa cells, including hnRNP Q. The major hnRNP Q isoform, Q1, directly bound SMN exon 7 in the vicinity of nucleotide +6. Overexpression of hnRNP Q1 promoted the inclusion of exon 7 in SMN2, probably by activating the use of its upstream 3' splice site. However, the minor isoforms Q2/Q3 could antagonize the activity of hnRNP Q1 and induced exon 7 exclusion. Intriguingly, enhanced exon 7 inclusion was also observed upon concomitant depletion of three hnRNP Q isoforms. Thus, differential expression of hnRNP Q isoforms may result in intricate control of SMN precursor mRNA splicing. Here, we demonstrate that hnRNP Q is a splicing modulator of SMN, further underscoring the potential of hnRNP Q as a therapeutic target for SMA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing
  • Animals
  • Base Sequence
  • Cell Line
  • Cyclic AMP Response Element-Binding Protein / genetics*
  • Exons*
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism*
  • Humans
  • Liver / physiology
  • Male
  • Mice
  • Mice, Knockout
  • Molecular Sequence Data
  • Muscular Atrophy, Spinal / genetics
  • Nerve Tissue Proteins / genetics*
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism*
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • RNA-Binding Proteins / genetics*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • SMN Complex Proteins
  • Sequence Alignment
  • Survival of Motor Neuron 1 Protein
  • Survival of Motor Neuron 2 Protein
  • Testis / physiology

Substances

  • Cyclic AMP Response Element-Binding Protein
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Nerve Tissue Proteins
  • Protein Isoforms
  • RNA Precursors
  • RNA-Binding Proteins
  • Recombinant Proteins
  • SMN Complex Proteins
  • SMN1 protein, human
  • SMN2 protein, human
  • Smn1 protein, mouse
  • Survival of Motor Neuron 1 Protein
  • Survival of Motor Neuron 2 Protein