Structures of the signal recognition particle receptor from the archaeon Pyrococcus furiosus: implications for the targeting step at the membrane

PLoS One. 2008;3(11):e3619. doi: 10.1371/journal.pone.0003619. Epub 2008 Nov 3.

Abstract

In all organisms, a ribonucleoprotein called the signal recognition particle (SRP) and its receptor (SR) target nascent proteins from the ribosome to the translocon for secretion or membrane insertion. We present the first X-ray structures of an archeal FtsY, the receptor from the hyper-thermophile Pyrococcus furiosus (Pfu), in its free and GDP*magnesium-bound forms. The highly charged N-terminal domain of Pfu-FtsY is distinguished by a long N-terminal helix. The basic charges on the surface of this helix are likely to regulate interactions at the membrane. A peripheral GDP bound near a regulatory motif could indicate a site of interaction between the receptor and ribosomal or SRP RNAs. Small angle X-ray scattering and analytical ultracentrifugation indicate that the crystal structure of Pfu-FtsY correlates well with the average conformation in solution. Based on previous structures of two sub-complexes, we propose a model of the core of archeal and eukaryotic SRP*SR targeting complexes.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis Proteins / chemistry
  • Cell Membrane / metabolism*
  • Chloroplast Proteins
  • Crystallography, X-Ray
  • DNA-Directed DNA Polymerase / chemistry
  • Guanosine Diphosphate / metabolism
  • Membrane Proteins / chemistry
  • Models, Molecular
  • Protein Binding
  • Protein Stability
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Protein Transport
  • Pyrococcus furiosus* / chemistry
  • Pyrococcus furiosus* / metabolism
  • Receptors, Cytoplasmic and Nuclear / chemistry*
  • Receptors, Cytoplasmic and Nuclear / metabolism*
  • Receptors, Peptide / chemistry*
  • Receptors, Peptide / metabolism*
  • Sequence Homology, Amino Acid

Substances

  • Arabidopsis Proteins
  • Chloroplast Proteins
  • Membrane Proteins
  • Receptors, Cytoplasmic and Nuclear
  • Receptors, Peptide
  • cpFtsY protein, Arabidopsis
  • signal peptide receptor
  • Guanosine Diphosphate
  • Pfu DNA polymerase
  • DNA-Directed DNA Polymerase