The importance of taxon sampling in genomic studies: an example from the cyclooxygenases of teleost fishes

Mol Phylogenet Evol. 2010 Jul;56(1):451-5. doi: 10.1016/j.ympev.2010.04.003. Epub 2010 Apr 9.

Abstract

Comparative genomic studies must often rely on single model species and exemplars to represent the genetic variation both within and among different major groups, because of technological, financial, and time constraints. This study of the cyclooxygenases from teleost fishes serves as a reminder that caution is required in these cases, since such incomplete taxon sampling can lead to errors in the interpretation and prediction of genome evolution, function, and structure.

MeSH terms

  • Animals
  • Bayes Theorem
  • Comparative Genomic Hybridization
  • Evolution, Molecular*
  • Fishes / classification
  • Fishes / genetics*
  • Likelihood Functions
  • Models, Genetic
  • Phylogeny*
  • Prostaglandin-Endoperoxide Synthases / genetics*
  • Sequence Analysis, DNA

Substances

  • Prostaglandin-Endoperoxide Synthases