Efficient and cost-effective extraction of genomic DNA from formalin-fixed and paraffin-embedded tissues

Vet Pathol. 2011 Jul;48(4):834-8. doi: 10.1177/0300985810380399. Epub 2010 Sep 3.

Abstract

Diagnostic and investigative molecular pathology frequently has to resort to extraction of DNA from formalin-fixed and paraffin-embedded tissue samples. Although many different protocols are reported for this type of material, extraction of sufficient amounts of intact DNA is still challenging. Here, the authors report a reproducible, simple, cost-effective, and efficient protocol that yields up to 140 μg of DNA from approximately 10 to 15 mg of formalin-fixed and paraffin-embedded tissue samples and compare it to available protocols. The protocol allows stable amplification of DNA fragments up to 600 bp in length in a wide variety of tissues.

MeSH terms

  • Animals
  • Cats / genetics*
  • Cost-Benefit Analysis
  • DNA / genetics
  • DNA / isolation & purification*
  • Dogs / genetics*
  • Electrophoresis, Agar Gel / economics
  • Fixatives / chemistry
  • Formaldehyde / chemistry
  • Genome / genetics
  • Paraffin Embedding / economics
  • Paraffin Embedding / veterinary*
  • Polymerase Chain Reaction / economics
  • Tissue Fixation / economics
  • Tissue Fixation / veterinary*

Substances

  • Fixatives
  • Formaldehyde
  • DNA