The structure of a family GH25 lysozyme from Aspergillus fumigatus

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Sep 1;66(Pt 9):973-7. doi: 10.1107/S1744309110025601. Epub 2010 Aug 21.

Abstract

Lysins are important biomolecules which cleave the bacterial cell-wall polymer peptidoglycan. They are finding increasing commercial and medical application. In order to gain an insight into the mechanism by which these enzymes operate, the X-ray structure of a CAZy family GH25 ;lysozyme' from Aspergillus fumigatus was determined. This is the first fungal structure from the family and reveals a modified alpha/beta-barrel-like fold in which an eight-stranded beta-barrel is flanked by three alpha-helices. The active site lies toward the bottom of a negatively charged pocket and its layout has much in common with other solved members of the GH25 and related GH families. A conserved active-site DXE motif may be implicated in catalysis, lending further weight to the argument that this glycoside hydrolase family operates via a ;substrate-assisted' catalytic mechanism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Aspergillus fumigatus / enzymology*
  • Crystallography, X-Ray
  • Models, Molecular
  • Molecular Sequence Data
  • Muramidase / chemistry*
  • Protein Structure, Tertiary
  • Sequence Alignment

Substances

  • Muramidase

Associated data

  • PDB/ACTACE5A1