Mouse and other rodent models of C to U RNA editing

Methods Mol Biol. 2011:718:121-35. doi: 10.1007/978-1-61779-018-8_7.

Abstract

Substitutional RNA editing represents an important posttranscriptional enzymatic pathway for increasing genetic plasticity by permitting production of different translation products from a single genomically encoded template. One of the best-characterized examples in mammals is C to U deamination of the nuclear apolipoprotein B (apoB) mRNA. ApoB mRNA undergoes a single, site-specific cytidine deamination event yielding an edited transcript that results in tissue-specific translation of two distinct isoforms, referred to as apoB100 and apoB48. Tissue- and site-specific cytidine deamination of apoB mRNA is mediated by an incompletely characterized holoenzyme containing a minimal core complex consisting of an RNA-specific cytidine deaminase, Apobec-1 and a requisite cofactor, apobec-1 complementation factor (ACF). The underlying biochemical and genetic mechanisms regulating tissue-specific apoB mRNA editing have been accelerated through development and characterization of physiological rodent models as well as knockout and transgenic animal strains.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • APOBEC-1 Deaminase
  • Animals
  • Apolipoproteins B / genetics*
  • Cells, Cultured
  • Cytidine / genetics
  • Cytidine / metabolism*
  • Cytidine Deaminase / genetics
  • Cytidine Deaminase / metabolism
  • Down-Regulation
  • Hepatocytes / metabolism
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Lipid Metabolism
  • Mice
  • Mice, Transgenic
  • RNA Editing*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • Rats
  • Uridine / genetics
  • Uridine / metabolism*

Substances

  • Apolipoproteins B
  • Heterogeneous-Nuclear Ribonucleoproteins
  • RNA, Messenger
  • Cytidine
  • APOBEC-1 Deaminase
  • Apobec1 protein, mouse
  • Apobec1 protein, rat
  • Cytidine Deaminase
  • Uridine