miR-122 activates hepatitis C virus translation by a specialized mechanism requiring particular RNA components

Nucleic Acids Res. 2011 Sep 1;39(17):7716-29. doi: 10.1093/nar/gkr426. Epub 2011 Jun 7.

Abstract

In animals, microRNAs (miRNAs) generally repress gene expression by binding to sites in the 3'-untranslated region (UTR) of target mRNAs. miRNAs have also been reported to repress or activate gene expression by binding to 5'-UTR sites, but the extent of such regulation and the factors that govern these different responses are unknown. Liver-specific miR-122 binds to sites in the 5'-UTR of hepatitis C virus (HCV) RNA and positively regulates the viral life cycle, in part by stimulating HCV translation. Here, we characterize the features that allow miR-122 to activate translation via the HCV 5'-UTR. We find that this regulation is a highly specialized process that requires uncapped RNA, the HCV internal ribosome entry site (IRES) and the 3' region of miR-122. Translation activation does not involve a previously proposed structural transition in the HCV IRES and is mediated by Argonaute proteins. This study provides an important insight into the requirements for the miR-122-HCV interaction, and the broader consequences of miRNAs binding to 5'-UTR sites.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions*
  • Argonaute Proteins / physiology
  • Binding Sites
  • Cell Line
  • Hepacivirus / genetics*
  • Humans
  • MicroRNAs / antagonists & inhibitors
  • MicroRNAs / chemistry
  • MicroRNAs / metabolism*
  • Open Reading Frames
  • Peptide Chain Initiation, Translational*
  • RNA Cap Analogs / metabolism
  • RNA, Viral / chemistry*
  • RNA, Viral / metabolism

Substances

  • 5' Untranslated Regions
  • Argonaute Proteins
  • MicroRNAs
  • RNA Cap Analogs
  • RNA, Viral