Identification of a novel HIV-1 circulating recombinant form (CRF62_BC) in western Yunnan of China

AIDS Res Hum Retroviruses. 2014 Apr;30(4):380-3. doi: 10.1089/aid.2013.0235. Epub 2013 Dec 9.

Abstract

We report here a novel HIV-1 circulating recombinant form (CRF62_BC) that was isolated from three epidemiologically unlinked individuals [one from an injecting drug user (IDU); two from heterosexuals] in Dehong prefecture of western Yunnan province. CRF62_BC harbored two subtype B segments in the pol and vpu-env regions in a subtype C backbone. Subregion tree analysis demonstrated that subtype B regions originated from a Thai-B (subtype B') lineage and the subtype C region was from an India C lineage. CRF62_BC is the fourth CRF composed of subtypes B' and C known to date after CRF07_BC, CRF08_BC, and CRF57_BC, which were originally found among IDUs in China. The emergence of CRF62_BC may indicate the continual generation of new recombinant strains in various high-risk populations in western Yunnan. This may complicate the development of effective vaccines to limit the HIV-1 epidemic and increase the difficulty of AIDS prevention and control in China.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • China
  • Cluster Analysis
  • Evolution, Molecular
  • Female
  • Genome, Viral*
  • Genotype
  • HIV Infections / virology*
  • HIV-1 / classification*
  • HIV-1 / genetics*
  • HIV-1 / isolation & purification
  • Humans
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Phylogeny
  • RNA Viruses / genetics*
  • RNA Viruses / isolation & purification
  • RNA, Viral / genetics
  • Recombination, Genetic*
  • Sequence Analysis, DNA*

Substances

  • RNA, Viral

Associated data

  • GENBANK/KC870034
  • GENBANK/KC870035
  • GENBANK/KC870037