Metal-induced isomerization yields an intracellular chelator that disrupts bacterial iron homeostasis

Chem Biol. 2014 Jan 16;21(1):136-45. doi: 10.1016/j.chembiol.2013.11.007. Epub 2013 Dec 19.

Abstract

The dwindling supply of antibiotics that remain effective against drug-resistant bacterial pathogens has precipitated efforts to identify new compounds that inhibit bacterial growth using untapped mechanisms of action. Here, we report both (1) a high-throughput screening methodology designed to discover chemical perturbants of the essential, yet unexploited, process of bacterial iron homeostasis, and (2) our findings from a small-molecule screen of more than 30,000 diverse small molecules that led to the identification and characterization of two spiro-indoline-thiadiazoles that disrupt iron homeostasis in bacteria. We show that these compounds are intracellular chelators with the capacity to exist in two isomeric states. Notably, these spiroheterocyles undergo a transition to an open merocyanine chelating form with antibacterial activity that is specifically induced in the presence of its transition-metal target.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemical synthesis
  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / antagonists & inhibitors
  • Benzopyrans / chemical synthesis
  • Benzopyrans / chemistry
  • Benzopyrans / pharmacology
  • Crystallography, X-Ray
  • Dose-Response Relationship, Drug
  • Drug Evaluation, Preclinical
  • Escherichia coli / drug effects*
  • Escherichia coli / metabolism
  • High-Throughput Screening Assays
  • Homeostasis / drug effects*
  • Indoles / chemical synthesis
  • Indoles / chemistry
  • Indoles / pharmacology
  • Iron / metabolism*
  • Iron Chelating Agents / chemical synthesis
  • Iron Chelating Agents / chemistry*
  • Iron Chelating Agents / pharmacology*
  • Organometallic Compounds / chemical synthesis
  • Organometallic Compounds / chemistry
  • Organometallic Compounds / pharmacology*
  • Small Molecule Libraries
  • Spiro Compounds / chemistry
  • Stereoisomerism
  • Structure-Activity Relationship
  • Thiadiazoles / chemistry
  • Transcription Factors / antagonists & inhibitors
  • Transition Elements / chemistry
  • Transition Elements / pharmacology*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Benzopyrans
  • Indoles
  • Iron Chelating Agents
  • Organometallic Compounds
  • Small Molecule Libraries
  • Spiro Compounds
  • Thiadiazoles
  • Transcription Factors
  • Transition Elements
  • iron response regulator protein, Bacteria
  • merocyanine
  • indoline
  • Iron