Incremental value of multiplex real-time PCR for the early diagnosis of sepsis in the emergency department

Swiss Med Wkly. 2014 Feb 4:144:w13911. doi: 10.4414/smw.2014.13911.

Abstract

Background: Delayed recognition of sepsis and inappropriate initial antibiotic therapy are associated with increased mortality and morbidity. The early detection of the causative organism in sepsis is an unmet clinical need. A novel multiplex real-time polymerase chain reaction (MRT-PCR) (SeptiFast®) technique may provide the microbiological diagnosis within six hours.

Methods: We assessed the diagnostic accuracy of blood cultures and MRT-PCR in a comparative diagnostic cohort study in 110 consecutive adult patients presenting to the emergency department (ED) with suspected sepsis.

Results: We collected 205 corresponding PCR samples and blood culture (BC) pairs from the 110 patients. There was moderate to high concordance between PCR and BC with 181 (88%) matching and 24 (12%) mismatching samples. The diagnostic accuracy of MRT-PCR in detecting sepsis and its causative organism was comparable to that of BCs. The additional use of MRT-PCR significantly reduced the time to microbiological diagnosis as compared to the use of conventional microbiological methods alone (mean time gained 3.9 hours, range 0-66 hours, p <0.001).

Conclusion: Diagnostic accuracy of BCs and MRT-PCR in the early diagnosis of sepsis and its causative organism in the ED are comparable. However, MRT-PCR reduces the time to microbiological diagnosis. Whether a more rapid detection of the organism by MRT-PCR could improve the outcome of patients has to be assessed in large prospective randomised trials.

Publication types

  • Comparative Study
  • Controlled Clinical Trial
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Bacteremia / blood
  • Bacteremia / diagnosis*
  • Bacteremia / microbiology
  • Blood / microbiology
  • Blood Chemical Analysis
  • DNA, Bacterial / analysis*
  • DNA, Fungal / analysis*
  • Early Diagnosis
  • Emergency Service, Hospital*
  • Female
  • Fungemia / blood
  • Fungemia / diagnosis*
  • Fungemia / microbiology
  • Humans
  • Male
  • Middle Aged
  • Predictive Value of Tests
  • Prospective Studies
  • Real-Time Polymerase Chain Reaction*
  • Single-Blind Method
  • Time Factors

Substances

  • DNA, Bacterial
  • DNA, Fungal