Dermacozines H-J isolated from a deep-sea strain of Dermacoccus abyssi from Mariana Trench sediments

J Nat Prod. 2014 Feb 28;77(2):416-20. doi: 10.1021/np400952d. Epub 2014 Feb 5.

Abstract

Dermacoccus abyssi sp. nov. strains MT1.1 and MT1.2 are actinomycetes isolated from a Mariana Trench sediment at a depth of 10 898 m. The fermentation process using complex media led to the production of three new pigmented heteroaromatic (oxidized and reduced) phenazine compounds, dermacozines H-J (1-3). Extensive use was made of 1D and 2D NMR experiments and high-resolution MS to determine the structures of the compounds. The new dermacozines showed radical scavenging activity, and the highest activity was observed for dermacozine H (1), with an IC50 value of 18.8 μM.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry*
  • Biphenyl Compounds / pharmacology
  • DNA, Bacterial / genetics
  • Free Radical Scavengers / chemistry
  • Free Radical Scavengers / isolation & purification*
  • Free Radical Scavengers / pharmacology
  • Geologic Sediments / chemistry
  • Inhibitory Concentration 50
  • Molecular Structure
  • Nuclear Magnetic Resonance, Biomolecular
  • Oxidation-Reduction
  • Phenazines / chemistry
  • Phenazines / isolation & purification*
  • Phenazines / pharmacology
  • Phylogeny
  • Picrates / pharmacology

Substances

  • Biphenyl Compounds
  • DNA, Bacterial
  • Free Radical Scavengers
  • Phenazines
  • Picrates
  • dermacozine H
  • 1,1-diphenyl-2-picrylhydrazyl