[Gene polymorphisms in the dihydrofolate reductase ( dhfr ) and dihydropteroate synthase ( dhps ) genes and structural modelling of the dhps gene in Colombian isolates of Toxoplasma gondii]

Biomedica. 2014 Oct-Dec;34(4):556-66. doi: 10.1590/S0120-41572014000400008.
[Article in Spanish]

Abstract

Introduction: There are no reports describing polymorphisms in target genes of anti- Toxoplasma drugs in South American isolates.

Objective: This study sought to perform cloning and sequencing of the dihydrofolate reductase ( dhfr ) and dihydropteroate-synthase ( dhps ) genes of the reference Rh strain and two Colombian isolates of Toxoplasma gondii .

Materials and methods: Two isolates were obtained from the cerebrospinal fluid of HIV-infected patients with cerebral toxoplasmosis. A DNA extraction technique and PCR assay for the dhfr and dhps genes were standardized, and the products of amplification were cloned into Escherichia coli and sequenced.

Results: One polymorphism (A « G) was found at position 235 of exon 2 in the dhps gene. In addition, two polymorphisms (G « C) at positions 259 and 260 and one polymorphism (T « G) at position 371 within exon 4 of the dhps gene were detected. In this last exon, a bioinformatic analysis revealed a non-synonymous polymorphism in the coding region that could lead to the substitution of Glu (CAA or CAG) for His (encoded by codons AAU or AAC). A structural model of the T. gondii DHPS protein was calculated, and the results revealed modifications in secondary structure due to mutations.

Conclusions: The methods described in this study can be used as a tool to search for polymorphisms in samples from patients with different clinical manifestations of toxoplasmosis and to examine their relationship with the therapeutic response.

Publication types

  • English Abstract
  • Multicenter Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • AIDS-Related Opportunistic Infections / cerebrospinal fluid
  • AIDS-Related Opportunistic Infections / parasitology
  • Amino Acid Substitution
  • Animals
  • Base Sequence
  • Cerebrospinal Fluid / parasitology
  • Cloning, Molecular
  • Colombia
  • DNA, Protozoan / genetics
  • DNA, Recombinant / genetics
  • Dihydropteroate Synthase / chemistry
  • Dihydropteroate Synthase / genetics*
  • Exons / genetics
  • Humans
  • Male
  • Mice
  • Models, Molecular
  • Molecular Sequence Data
  • Polymorphism, Single Nucleotide*
  • Protein Conformation
  • Protozoan Proteins / chemistry
  • Protozoan Proteins / genetics*
  • Sequence Alignment
  • Sequence Homology, Nucleic Acid
  • Tetrahydrofolate Dehydrogenase / genetics*
  • Toxoplasma / enzymology*
  • Toxoplasma / genetics
  • Toxoplasma / isolation & purification
  • Toxoplasmosis, Animal / parasitology
  • Toxoplasmosis, Cerebral / cerebrospinal fluid
  • Toxoplasmosis, Cerebral / parasitology

Substances

  • DNA, Protozoan
  • DNA, Recombinant
  • Protozoan Proteins
  • Tetrahydrofolate Dehydrogenase
  • Dihydropteroate Synthase