Outward Rectification of Voltage-Gated K+ Channels Evolved at Least Twice in Life History

PLoS One. 2015 Sep 10;10(9):e0137600. doi: 10.1371/journal.pone.0137600. eCollection 2015.

Abstract

Voltage-gated potassium (K+) channels are present in all living systems. Despite high structural similarities in the transmembrane domains (TMD), this K+ channel type segregates into at least two main functional categories-hyperpolarization-activated, inward-rectifying (Kin) and depolarization-activated, outward-rectifying (Kout) channels. Voltage-gated K+ channels sense the membrane voltage via a voltage-sensing domain that is connected to the conduction pathway of the channel. It has been shown that the voltage-sensing mechanism is the same in Kin and Kout channels, but its performance results in opposite pore conformations. It is not known how the different coupling of voltage-sensor and pore is implemented. Here, we studied sequence and structural data of voltage-gated K+ channels from animals and plants with emphasis on the property of opposite rectification. We identified structural hotspots that alone allow already the distinction between Kin and Kout channels. Among them is a loop between TMD S5 and the pore that is very short in animal Kout, longer in plant and animal Kin and the longest in plant Kout channels. In combination with further structural and phylogenetic analyses this finding suggests that outward-rectification evolved twice and independently in the animal and plant kingdom.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biological Evolution*
  • Cluster Analysis
  • Databases, Genetic
  • Models, Molecular
  • Plants / metabolism
  • Potassium Channels, Voltage-Gated / chemistry*
  • Potassium Channels, Voltage-Gated / metabolism*
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Structure-Activity Relationship

Substances

  • Potassium Channels, Voltage-Gated

Grants and funding

This work was supported by grants from the Chilean Fondo Nacional de Desarrollo Científico y Tecnológico (http://www.conicyt.cl/fondecyt) to JR (No. 3150173) and WG (No. 1140624), and by the Chilean Comisión Nacional de Investigación Científica y Tecnológica (http://www.conicyt.cl) to JR and WG (Anillo ACT-1104). ID was supported by grants of the Deutsche Forschungsgemeinschaft (DR430/8-1) (http://www.dfg.de/) and Marie Curie Career Integration Grant of the European Union (FP7-PEOPLE-2011-CIG No. 303674–Regopoc) (http://ec.europa.eu/research/mariecurieactions/about-mca/actions/cig/index_en.htm). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.