Screening and Identification of a Phage Display Derived Peptide That Specifically Binds to the CD44 Protein Region Encoded by Variable Exons

J Biomol Screen. 2016 Jan;21(1):44-53. doi: 10.1177/1087057115608604. Epub 2015 Sep 30.

Abstract

CD44, especially the isoforms with variable exons (CD44v), is a promising biomarker for the detection of cancer. To develop a CD44v-specific probe, we screened a 7-mer phage peptide library against the CD44v3-v10 protein using an improved subtractive method. The consensus sequences with the highest frequency (designated CV-1) emerged after four rounds of panning. The binding affinity and specificity of the CV-1 phage and the synthesized peptide for the region of CD44 encoded by the variable exons were confirmed using enzyme-linked immunosorbent assay and competitive inhibition assays. Furthermore, the binding of the CV-1 probe to gastric cancer cells and tissues was validated using immunofluorescence and immunohistochemistry assays. CV-1 sensitively and specifically bound to CD44v on cancer cells and tissues. Thus, CV-1 has the potential to serve as a promising probe for cancer molecular imaging and target therapy.

Keywords: CD44v; cancer targeting; peptide probe; phage display.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteriophages / metabolism
  • Binding, Competitive / physiology
  • Cell Line
  • Cell Line, Tumor
  • Exons
  • Fluorescent Antibody Technique / methods
  • HEK293 Cells
  • Humans
  • Hyaluronan Receptors / metabolism*
  • Immunohistochemistry / methods
  • Peptide Library
  • Peptides / metabolism*
  • Protein Binding / physiology
  • Sensitivity and Specificity
  • Stomach Neoplasms / diagnosis
  • Stomach Neoplasms / metabolism

Substances

  • CD44 protein, human
  • Hyaluronan Receptors
  • Peptide Library
  • Peptides