Aryl Bis-Sulfonamide Inhibitors of IspF from Arabidopsis thaliana and Plasmodium falciparum

ChemMedChem. 2015 Dec;10(12):2090-8. doi: 10.1002/cmdc.201500382. Epub 2015 Oct 5.

Abstract

2-Methylerythritol 2,4-cyclodiphosphate synthase (IspF) is an essential enzyme for the biosynthesis of isoprenoid precursors in plants and many human pathogens. The protein is an attractive target for the development of anti-infectives and herbicides. Using a photometric assay, a screen of 40 000 compounds on IspF from Arabidopsis thaliana afforded symmetrical aryl bis-sulfonamides that inhibit IspF from A. thaliana (AtIspF) and Plasmodium falciparum (PfIspF) with IC50 values in the micromolar range. The ortho-bis-sulfonamide structural motif is essential for inhibitory activity. The best derivatives obtained by parallel synthesis showed IC50 values of 1.4 μm against PfIspF and 240 nm against AtIspF. Substantial herbicidal activity was observed at a dose of 2 kg ha(-1) . Molecular modeling studies served as the basis for an in silico search targeted at the discovery of novel, non-symmetrical sulfonamide IspF inhibitors. The designed compounds were found to exhibit inhibitory activities in the double-digit micromolar IC50 range.

Keywords: P. falciparum; bis-sulfonamides; docking; inhibitors; isoprenoid biosynthesis; non-mevalonate pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / enzymology*
  • Binding Sites
  • Crystallography, X-Ray
  • Drug Design
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / chemistry*
  • Enzyme Inhibitors / metabolism
  • Inhibitory Concentration 50
  • Kinetics
  • Molecular Conformation
  • Molecular Docking Simulation
  • Phosphorus-Oxygen Lyases / antagonists & inhibitors*
  • Phosphorus-Oxygen Lyases / metabolism
  • Plasmodium falciparum / enzymology*
  • Protein Binding
  • Protein Structure, Tertiary
  • Protozoan Proteins / antagonists & inhibitors*
  • Protozoan Proteins / metabolism
  • Spectrometry, Mass, Electrospray Ionization
  • Structure-Activity Relationship
  • Sulfonamides / chemical synthesis
  • Sulfonamides / chemistry*
  • Sulfonamides / metabolism

Substances

  • Enzyme Inhibitors
  • Protozoan Proteins
  • Sulfonamides
  • Phosphorus-Oxygen Lyases
  • IspF protein, Arabidopsis