Probing the Acid-Induced Packing Structure Changes of the Molten Globule Domains of a Protein near Equilibrium Unfolding

J Phys Chem Lett. 2017 Jan 19;8(2):470-477. doi: 10.1021/acs.jpclett.6b02722. Epub 2017 Jan 9.

Abstract

Using simultaneously scanning small-angle X-ray scattering (SAXS) and UV-vis absorption with integrated online size exclusion chromatography, supplemental with molecular dynamics simulations, we unveil the long-postulated global structure evolution of a model multidomain protein bovine serum albumin (BSA) during acid-induced unfolding. Our results differentiate three global packing structures of the three molten globule domains of BSA, forming three intermediates I1, I2, and E along the unfolding pathway. The I1-I2 transition, overlooked in all previous studies, involves mainly coordinated reorientations across interconnected molten globule subdomains, and the transition activates a critical pivot domain opening of the protein for entering into the E form, with an unexpectedly large unfolding free energy change of -9.5 kcal mol-1, extracted based on the observed packing structural changes. The revealed local packing flexibility and rigidity of the molten globule domains in the E form elucidate how collective motions of the molten globule domains profoundly influence the folding-unfolding pathway of a multidomain protein.

MeSH terms

  • Molecular Dynamics Simulation
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Denaturation
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Protein Unfolding
  • Proteins / chemistry*
  • Scattering, Small Angle
  • Serum Albumin, Bovine / chemistry*
  • X-Ray Diffraction

Substances

  • Proteins
  • Serum Albumin, Bovine