Conformational Behaviour of Azasugars Based on Mannuronic Acid

Chembiochem. 2017 Jul 4;18(13):1297-1304. doi: 10.1002/cbic.201700080. Epub 2017 Apr 18.

Abstract

A set of mannuronic-acid-based iminosugars, consisting of the C-5-carboxylic acid, methyl ester and amide analogues of 1deoxymannorjirimicin (DMJ), was synthesised and their pH-dependent conformational behaviour was studied. Under acidic conditions the methyl ester and the carboxylic acid adopted an "inverted" 1 C4 chair conformation as opposed to the "normal" 4 C1 chair at basic pH. This conformational change is explained in terms of the stereoelectronic effects of the ring substituents and it parallels the behaviour of the mannuronic acid ester oxocarbenium ion. Because of this solution-phase behaviour, the mannuronic acid ester azasugar was examined as an inhibitor for a Caulobacter GH47 mannosidase that hydrolyses its substrates by way of a reaction itinerary that proceeds through a 3 H4 transition state. No binding was observed for the mannuronic acid ester azasugar, but sub-atomic resolution data were obtained for the DMJ⋅CkGH47 complex, showing two conformations-3 S1 and 1 C4 -for the DMJ inhibitor.

Keywords: azasugars; conformation analysis; inhibitor design; mannosidases; stereoelectronic effects.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aza Compounds / chemical synthesis
  • Aza Compounds / chemistry*
  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / chemistry
  • Carbohydrate Conformation
  • Carbohydrate Sequence
  • Carboxylic Acids / chemistry*
  • Caulobacter / chemistry
  • Caulobacter / enzymology
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / chemistry*
  • Esters / chemistry
  • Hexuronic Acids / chemistry*
  • Hydrogen-Ion Concentration
  • Imino Sugars / chemical synthesis
  • Imino Sugars / chemistry*
  • Mannosidases / antagonists & inhibitors*
  • Mannosidases / chemistry
  • Models, Molecular

Substances

  • Aza Compounds
  • Bacterial Proteins
  • Carboxylic Acids
  • Enzyme Inhibitors
  • Esters
  • Hexuronic Acids
  • Imino Sugars
  • mannuronic acid
  • Mannosidases