A moving target: structure and disorder in pursuit of Myc inhibitors

Biochem Soc Trans. 2017 Jun 15;45(3):709-717. doi: 10.1042/BST20160328.

Abstract

The Myc proteins comprise a family of ubiquitous regulators of gene expression implicated in over half of all human cancers. They interact with a large number of other proteins, such as transcription factors, chromatin-modifying enzymes and kinases. Remarkably, few of these interactions have been characterized structurally. This is at least in part due to the intrinsically disordered nature of Myc proteins, which adopt a defined conformation only in the presence of binding partners. Owing to this behaviour, crystallographic studies on Myc proteins have been limited to short fragments in complex with other proteins. Most recently, we determined the crystal structure of Aurora-A kinase domain bound to a 28-amino acid fragment of the N-Myc transactivation domain. The structure reveals an α-helical segment within N-Myc capped by two tryptophan residues that recognize the surface of Aurora-A. The kinase domain acts as a molecular scaffold, independently of its catalytic activity, upon which this region of N-Myc becomes ordered. The binding site for N-Myc on Aurora-A is disrupted by certain ATP-competitive inhibitors, such as MLN8237 (alisertib) and CD532, and explains how these kinase inhibitors are able to disrupt the protein-protein interaction to affect Myc destabilization. Structural studies on this and other Myc complexes will lead to the design of protein-protein interaction inhibitors as chemical tools to dissect the complex pathways of Myc regulation and function, which may be developed into Myc inhibitors for the treatment of cancer.

Keywords: NMR spectroscopy; aurora kinases; crystallography; intrinsically disordered proteins.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aurora Kinase A / antagonists & inhibitors*
  • Aurora Kinase A / chemistry*
  • Aurora Kinase A / metabolism
  • Azepines / pharmacology*
  • Azepines / therapeutic use
  • Humans
  • Neoplasms / drug therapy
  • Neoplasms / metabolism
  • Phenylurea Compounds / pharmacology*
  • Phenylurea Compounds / therapeutic use
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Kinase Inhibitors / pharmacology*
  • Protein Kinase Inhibitors / therapeutic use
  • Protein Structure, Tertiary
  • Proto-Oncogene Proteins c-myc / antagonists & inhibitors*
  • Proto-Oncogene Proteins c-myc / chemistry*
  • Proto-Oncogene Proteins c-myc / metabolism
  • Pyrimidines / pharmacology*
  • Pyrimidines / therapeutic use

Substances

  • Azepines
  • CD532 compound
  • MLN 8237
  • Phenylurea Compounds
  • Protein Kinase Inhibitors
  • Proto-Oncogene Proteins c-myc
  • Pyrimidines
  • AURKA protein, human
  • Aurora Kinase A