The thioreduction component CcmG confers efficiency and the heme ligation component CcmH ensures stereo-specificity during cytochrome c maturation

J Biol Chem. 2017 Aug 11;292(32):13154-13167. doi: 10.1074/jbc.M117.794586. Epub 2017 Jun 20.

Abstract

In many Gram-negative bacteria, including Rhodobacter capsulatus, cytochrome c maturation (Ccm) is carried out by a membrane-integral machinery composed of nine proteins (CcmA to I). During this process, the periplasmic thiol-disulfide oxidoreductase DsbA is thought to catalyze the formation of a disulfide bond between the Cys residues at the apocytochrome c heme-binding site (CXXCH). Subsequently, a Ccm-specific thioreductive pathway involving CcmG and CcmH reduces this disulfide bond to allow covalent heme ligation. Currently, the sequence of thioredox reactions occurring between these components and apocytochrome c and the identity of their active Cys residues are unknown. In this work, we first investigated protein-protein interactions among the apocytochrome c, CcmG, and the heme-ligation components CcmF, CcmH, and CcmI. We found that they all interact with each other, forming a CcmFGHI-apocytochrome c complex. Using purified wild-type CcmG, CcmH, and apocytochrome c, as well as their respective Cys mutant variants, we determined the rates of thiol-disulfide exchange reactions between selected pairs of Cys residues from these proteins. We established that CcmG can efficiently reduce the disulfide bond of apocytochrome c and also resolve a mixed disulfide bond formed between apocytochrome c and CcmH. We further show that Cys-45 of CcmH and Cys-34 of apocytochrome c are most likely to form this mixed disulfide bond, which is consistent with the stereo-specificity of the heme-apocytochrome c ligation reaction. We conclude that CcmG confers efficiency, and CcmH ensures stereo-specificity during Ccm and present a comprehensive model for thioreduction reactions that lead to heme-apocytochrome c ligation.

Keywords: Rhodobacter capsulatus; apocytochrome; cytochrome c; cytochrome c maturation; disulfide; heme; protein–protein interaction; thiol; thiol–disulfide exchange; thioreduction.

MeSH terms

  • Amino Acid Substitution
  • Apoenzymes / chemistry
  • Apoenzymes / metabolism
  • Bacterial Outer Membrane Proteins / chemistry
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Binding Sites
  • Cysteine / chemistry
  • Cysteine / metabolism
  • Cystine / chemistry
  • Cystine / metabolism
  • Cytochromes c / chemistry
  • Cytochromes c / metabolism*
  • Heme / metabolism
  • Models, Biological*
  • Mutation
  • Oxidation-Reduction
  • Peptide Fragments / chemistry
  • Peptide Fragments / genetics
  • Peptide Fragments / metabolism
  • Protein Disulfide Reductase (Glutathione) / chemistry
  • Protein Disulfide Reductase (Glutathione) / genetics
  • Protein Disulfide Reductase (Glutathione) / metabolism*
  • Protein Interaction Domains and Motifs
  • Protein Multimerization
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Rhodobacter capsulatus / enzymology*
  • Stereoisomerism

Substances

  • Apoenzymes
  • Bacterial Outer Membrane Proteins
  • Bacterial Proteins
  • Peptide Fragments
  • Recombinant Fusion Proteins
  • Recombinant Proteins
  • Heme
  • Cystine
  • Cytochromes c
  • Protein Disulfide Reductase (Glutathione)
  • Cysteine