Def1 interacts with TFIIH and modulates RNA polymerase II transcription

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):13230-13235. doi: 10.1073/pnas.1707955114. Epub 2017 Nov 27.

Abstract

The DNA damage response is an essential process for the survival of living cells. In a subset of stress-responsive genes in humans, Elongin controls transcription in response to multiple stimuli, such as DNA damage, oxidative stress, and heat shock. Yeast Elongin (Ela1-Elc1), along with Def1, is known to facilitate ubiquitylation and degradation of RNA polymerase II (pol II) in response to multiple stimuli, yet transcription activity has not been examined. We have found that Def1 copurifies from yeast whole-cell extract with TFIIH, the largest general transcription factor required for transcription initiation and nucleotide excision repair. The addition of recombinant Def1 and Ela1-Elc1 enhanced transcription initiation in an in vitro reconstituted system including pol II, the general transcription factors, and TFIIS. Def1 also enhanced transcription restart from TFIIS-induced cleavage in a pol II transcribing complex. In the Δdef1 strain, heat shock genes were misregulated, indicating that Def1 is required for induction of some stress-responsive genes in yeast. Taken together, our results extend the understanding of the molecular mechanism of transcription regulation on cellular stress and reveal functional similarities to the mammalian system.

Keywords: Def1; RNA polymerase II; TFIIH; stress response; transcription.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromosomal Proteins, Non-Histone / genetics
  • Chromosomal Proteins, Non-Histone / metabolism*
  • Elongin / genetics
  • Elongin / metabolism
  • Protein Binding
  • RNA Polymerase II / metabolism*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Stress, Physiological
  • Transcription Factor TFIIH / metabolism*
  • Transcription Initiation, Genetic

Substances

  • Chromosomal Proteins, Non-Histone
  • DEF1 protein, S cerevisiae
  • ELA1 protein, S cerevisiae
  • ELC1 protein, S cerevisiae
  • Elongin
  • Saccharomyces cerevisiae Proteins
  • Transcription Factor TFIIH
  • RNA Polymerase II