A wild bootstrap approach for the Aalen-Johansen estimator

Biometrics. 2018 Sep;74(3):977-985. doi: 10.1111/biom.12861. Epub 2018 Feb 16.

Abstract

We suggest a wild bootstrap resampling technique for nonparametric inference on transition probabilities in a general time-inhomogeneous Markov multistate model. We first approximate the limiting distribution of the Nelson-Aalen estimator by repeatedly generating standard normal wild bootstrap variates, while the data is kept fixed. Next, a transformation using a functional delta method argument is applied. The approach is conceptually easier than direct resampling for the transition probabilities. It is used to investigate a non-standard time-to-event outcome, currently being alive without immunosuppressive treatment, with data from a recent study of prophylactic treatment in allogeneic transplanted leukemia patients. Due to non-monotonic outcome probabilities in time, neither standard survival nor competing risks techniques apply, which highlights the need for the present methodology. Finite sample performance of time-simultaneous confidence bands for the outcome probabilities is assessed in an extensive simulation study motivated by the clinical trial data. Example code is provided in the web-based Supplementary Materials.

Keywords: Blood cancer; Graft-versus-host-disease; Illness-death model; Resampling; Survival analysis; Time-dependent covariate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Clinical Trials as Topic
  • Computer Simulation
  • Hematopoietic Stem Cell Transplantation
  • Humans
  • Leukemia / mortality
  • Leukemia / therapy
  • Models, Statistical*
  • Probability*
  • Statistics, Nonparametric*
  • Survival Analysis*
  • Transplantation, Homologous