KMT2C mediates the estrogen dependence of breast cancer through regulation of ERα enhancer function

Oncogene. 2018 Aug;37(34):4692-4710. doi: 10.1038/s41388-018-0273-5. Epub 2018 May 14.

Abstract

Estrogen receptor alpha (ERα) is a ligand-activated nuclear receptor that directs proliferation and differentiation in selected cancer cell types including mammary-derived carcinomas. These master-regulatory functions of ERα require trans-acting elements such as the pioneer factor FOXA1 to establish a genomic landscape conducive to ERα control. Here, we identify the H3K4 methyltransferase KMT2C as necessary for hormone-driven ERα activity and breast cancer proliferation. KMT2C knockdown suppresses estrogen-dependent gene expression and causes H3K4me1 and H3K27ac loss selectively at ERα enhancers. Correspondingly, KMT2C loss impairs estrogen-driven breast cancer proliferation but has no effect on ER- breast cells. Whereas KMT2C loss disrupts estrogen-driven proliferation, it conversely promotes tumor outgrowth under hormone-depleted conditions. In accordance, KMT2C is one of the most frequently mutated genes in ER-positive breast cancer with KMT2C deletion correlating with significantly shorter progression-free survival on anti-estrogen therapy. From a therapeutic standpoint, KMT2C-depleted cells that develop hormone-independence retain their dependence on ERα, displaying ongoing sensitivity to ERα antagonists. We conclude that KMT2C is a key regulator of ERα activity whose loss uncouples breast cancer proliferation from hormone abundance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Breast Neoplasms / metabolism*
  • Cell Line
  • Cell Line, Tumor
  • Cell Proliferation / physiology
  • DNA-Binding Proteins / metabolism*
  • Estrogen Receptor alpha / metabolism*
  • Estrogens / metabolism*
  • Female
  • Gene Expression Regulation, Neoplastic / physiology
  • HEK293 Cells
  • Hepatocyte Nuclear Factor 3-alpha / metabolism
  • Humans
  • MCF-7 Cells
  • Mice
  • Mice, Inbred C57BL
  • Mice, Transgenic
  • Neoplasm Proteins / metabolism*
  • Progression-Free Survival
  • Signal Transduction / physiology

Substances

  • DNA-Binding Proteins
  • ESR1 protein, human
  • Estrogen Receptor alpha
  • Estrogens
  • Hepatocyte Nuclear Factor 3-alpha
  • KMT2D protein, human
  • Neoplasm Proteins