Highly disordered histone H1-DNA model complexes and their condensates

Proc Natl Acad Sci U S A. 2018 Nov 20;115(47):11964-11969. doi: 10.1073/pnas.1805943115. Epub 2018 Oct 9.

Abstract

Disordered proteins play an essential role in a wide variety of biological processes, and are often posttranslationally modified. One such protein is histone H1; its highly disordered C-terminal tail (CH1) condenses internucleosomal linker DNA in chromatin in a way that is still poorly understood. Moreover, CH1 is phosphorylated in a cell cycle-dependent manner that correlates with changes in the chromatin condensation level. Here we present a model system that recapitulates key aspects of the in vivo process, and also allows a detailed structural and biophysical analysis of the stages before and after condensation. CH1 remains disordered in the DNA-bound state, despite its nanomolar affinity. Phase-separated droplets (coacervates) form, containing higher-order assemblies of CH1/DNA complexes. Phosphorylation at three serine residues, spaced along the length of the tail, has little effect on the local properties of the condensate. However, it dramatically alters higher-order structure in the coacervate and reduces partitioning to the coacervate phase. These observations show that disordered proteins can bind tightly to DNA without a disorder-to-order transition. Importantly, they also provide mechanistic insights into how higher-order structures can be exquisitely sensitive to perturbation by posttranslational modifications, thus broadening the repertoire of mechanisms that might regulate chromatin and other macromolecular assemblies.

Keywords: chromatin; histone H1; intrinsic disorder; phase separation; phosphorylation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chromatin / metabolism
  • Chromatin Assembly and Disassembly / physiology
  • DNA / chemistry
  • DNA-Binding Proteins
  • Histones / chemistry*
  • Histones / metabolism*
  • Humans
  • Magnetic Resonance Spectroscopy
  • Nucleic Acid Conformation
  • Phosphorylation
  • Protein Binding
  • Protein Conformation
  • Protein Processing, Post-Translational

Substances

  • Chromatin
  • DNA-Binding Proteins
  • Histones
  • DNA