Soluble PD-L1 generated by endogenous retroelement exaptation is a receptor antagonist

Elife. 2019 Nov 15:8:e50256. doi: 10.7554/eLife.50256.

Abstract

Immune regulation is a finely balanced process of positive and negative signals. PD-L1 and its receptor PD-1 are critical regulators of autoimmune, antiviral and antitumoural T cell responses. Although the function of its predominant membrane-bound form is well established, the source and biological activity of soluble PD-L1 (sPD-L1) remain incompletely understood. Here, we show that sPD-L1 in human healthy tissues and tumours is produced by exaptation of an intronic LINE-2A (L2A) endogenous retroelement in the CD274 gene, encoding PD-L1, which causes omission of the transmembrane domain and the regulatory sequence in the canonical 3' untranslated region. The alternatively spliced CD274-L2A transcript forms the major source of sPD-L1 and is highly conserved in hominids, but lost in mice and a few related species. Importantly, CD274-L2A-encoded sPD-L1 lacks measurable T cell inhibitory activity. Instead, it functions as a receptor antagonist, blocking the inhibitory activity of PD-L1 bound on cellular or exosomal membranes.

Keywords: LINE; PD-L1; chromosomes; gene expression; human; immunology; inflammation; receptor antagonist; retroelement.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / genetics
  • Animals
  • B7-H1 Antigen / antagonists & inhibitors*
  • B7-H1 Antigen / chemistry
  • B7-H1 Antigen / genetics
  • B7-H1 Antigen / metabolism*
  • Cell Proliferation
  • Conserved Sequence / genetics
  • Evolution, Molecular
  • Exons / genetics
  • HEK293 Cells
  • Hominidae / genetics
  • Humans
  • Immunosuppression Therapy
  • Mice, Inbred C57BL
  • Protein Domains
  • Retroelements / genetics*
  • Solubility

Substances

  • B7-H1 Antigen
  • Retroelements