Detection of BCL11A and HBS1L-MYB Genotypes in Sickle Cell Anemia

Talal Qadah; Abdulwahab Noorwali; Fatma Alzahrani; Alaa Banjar; Najlaa Filimban; Raed Felimban

doi:10.1007/s12288-020-01270-3

Detection of BCL11A and HBS1L-MYB Genotypes in Sickle Cell Anemia

Indian J Hematol Blood Transfus. 2020 Oct;36(4):705-710. doi: 10.1007/s12288-020-01270-3. Epub 2020 Mar 3.

Authors

Talal Qadah^{1

2}, Abdulwahab Noorwali^{1

3}, Fatma Alzahrani⁴, Alaa Banjar^{1

2}, Najlaa Filimban¹, Raed Felimban^{1

2}

Affiliations

¹ Regenerative Medicine Unit, King Fahad Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
² Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, P.O. Box: 80324, Jeddah, 21589 Saudi Arabia.
³ Department of Biochemistry, Faculty of Medicine, King Abdulaziz University, Jeddah, Saudi Arabia.
⁴ Department of Pediatrics, King Abdulaziz University Hospital, Jeddah, Saudi Arabia.

Abstract

Sickle Cell Anemia (SCA) is one of the most common monogenic disorders worldwide. Molecular modifiers of clinical symptoms play an essential role in the amelioration of the effects of the disease. Single Nucleotide Polymorphisms (SNPs) of the BCL11A gene and within the HBS1L-MYB intergenic region, which are located outside the β-globin locus on chromosome 11, are considered to be genetic modifiers that are associated with elevated levels of foetal haemoglobin HbF, and thus they reduce the clinical impact of sickle haemoglobin, HbS. The work reported here aimed to detect the most common SNPs of BCL11A and HBS1L-MYB related to HbF in SCA patients and to estimate the frequency of occurrence of these genotypes. A total of 132 SCA patients whose condition was stable were recruited from Jeddah city, Saudi Arabia. SNPs at site locus rs4671393 on BCL11A, and at loci rs28384513 and rs9399137 on HBS1L-MYB were identified using TaqMan genotyping assay. Haematological parameters were analysed based on complete blood count and haemoglobin separation using the capillary electrophoresis technique. Highly significant differences in the diagnostic haematological parameters, including all blood-cell types and HbF, were observed between the study cohort and control groups. We also found that BCL11A rs4671393 genotypes of GG and AG were more likely to show increases in HbF levels than other genotypes. In addition, a strong relationship was found between HBS1L-MYB rs9399137 and rs28384513 genotypes in the cohort, whereas no significant association was observed between BCL11A rs4671393 variant and other variants. Our study highlights the importance of investigating genetic determinants that play roles in the amelioration of the severity of clinical symptoms and complications of SCA.

Keywords: HbF; Sickle cell anemia; Single Nucleotide Polymorphisms.