Global, cell non-autonomous gene regulation drives individual lifespan among isogenic C. elegans

Elife. 2021 Feb 1:10:e65026. doi: 10.7554/eLife.65026.

Abstract

Across species, lifespan is highly variable among individuals within a population. Even genetically identical Caenorhabditis elegans reared in homogeneous environments are as variable in lifespan as outbred human populations. We hypothesized that persistent inter-individual differences in expression of key regulatory genes drives this lifespan variability. As a test, we examined the relationship between future lifespan and the expression of 22 microRNA promoter::GFP constructs. Surprisingly, expression of nearly half of these reporters, well before death, could effectively predict lifespan. This indicates that prospectively long- vs. short-lived individuals have highly divergent patterns of transgene expression and transcriptional regulation. The gene-regulatory processes reported on by two of the most lifespan-predictive transgenes do not require DAF-16, the FOXO transcription factor that is a principal effector of insulin/insulin-like growth factor (IGF-1) signaling. Last, we demonstrate a hierarchy of redundancy in lifespan-predictive ability among three transgenes expressed in distinct tissues, suggesting that they collectively report on an organism-wide, cell non-autonomous process that acts to set each individual's lifespan.

Keywords: C. elegans; aging biomarker; chromosomes; computational biology; gene expression; individual variability; lifespan; systems biology.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aging
  • Animals
  • Biomarkers
  • Caenorhabditis elegans / genetics*
  • Caenorhabditis elegans / metabolism
  • Gene Expression Regulation*
  • Genes, Reporter / genetics
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Longevity*
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Signal Transduction

Substances

  • Biomarkers
  • MicroRNAs
  • Green Fluorescent Proteins