Implementation of multigene panel NGS diagnosis in the national primary ciliary dyskinesia cohort of Cyprus: An island with a high disease prevalence

Hum Mutat. 2021 Jun;42(6):e62-e77. doi: 10.1002/humu.24196. Epub 2021 Mar 25.

Abstract

We aimed to determine a genetic diagnosis in the national primary ciliary dyskinesia (PCD) cohort of Cyprus, an island with a high disease prevalence. We used targeted next-generation sequencing (NGS) of 39 PCD genes in 48 patients of Greek-Cypriot and other ancestries. We achieved a molecular diagnosis in 74% of the unrelated families tested. We identified 24 different mutations in 11 genes, 12 of which are novel. Homozygosity was more common in Greek-Cypriot than non-Greek-Cypriot patients (88% vs. 46.2%, p = .016). Four mutations (DNAH11:c.5095-2A>G, CFAP300:c.95_103delGCCGGCTCC, TTC25:c.716G>A, RSPH9:c.670+2T>C) were found in 74% of the diagnosed Greek-Cypriot families. Patients with RSPH9 mutations demonstrated higher nasal nitric oxide (57 vs. 15 nl/min, p <.001), higher forced expiratory volume in 1 s (-0.89 vs. -2.37, p = .018) and forced vital capacity (-1.00 vs. -2.16, p = .029) z scores than the rest of the cohort. Targeted multigene-panel NGS is an efficient tool for early diagnosis of PCD, providing insight into genetic disease epidemiology and improved patient stratification.

Keywords: genetic diagnosis; next-generation sequencing; primary ciliary dyskinesia; respiratory disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Child
  • Child, Preschool
  • Ciliary Motility Disorders / epidemiology*
  • Ciliary Motility Disorders / genetics*
  • Cohort Studies
  • Cyprus / epidemiology
  • DNA Mutational Analysis / methods
  • Family
  • Female
  • Genetic Testing / methods
  • Greece / ethnology
  • High-Throughput Nucleotide Sequencing* / methods
  • Humans
  • Infant
  • Male
  • Middle Aged
  • Molecular Diagnostic Techniques / methods
  • Mutation
  • Prevalence
  • Young Adult