Genetically Encoding Ultrastable Virus-like Particles Encapsulating Functional DNA Nanostructures in Living Bacteria

ACS Synth Biol. 2021 Aug 20;10(8):1798-1807. doi: 10.1021/acssynbio.0c00586. Epub 2021 Jun 2.

Abstract

DNA nanotechnology is leading the field of in vitro molecular-scale device engineering, accumulating to a dazzling array of applications. However, while DNA nanostructures' function is robust under in vitro settings, their implementation in real-world conditions requires overcoming their rapid degradation and subsequent loss of function. Viruses are sophisticated supramolecular assemblies, able to protect their nucleic acid content in inhospitable biological environments. Inspired by this natural ability, we engineered in vitro and in vivo technologies, enabling the encapsulation and protection of functional DNA nanostructures inside MS2 bacteriophage virus-like particles (VLPs). We demonstrate the ssDNA-VLPs nanocomposites' (NCs) abilities to encapsulate single-stranded-DNA (ssDNA) in a variety of sizes (200-1500 nucleotides (nt)), sequences, and structures while retaining their functionality. Moreover, by exposing these NCs to hostile biological conditions, such as human blood serum, we exhibit that the VLPs serve as an excellent protective shell. These engineered NCs pose critical properties that are yet unattainable by current fabrication methods.

Keywords: DNA nanostructures; MS2 VLPs; aptamers; nanocomposites; ssDNA encapsulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Single-Stranded* / chemistry
  • DNA, Single-Stranded* / genetics
  • DNA, Single-Stranded* / ultrastructure
  • DNA, Viral* / chemistry
  • DNA, Viral* / genetics
  • DNA, Viral* / ultrastructure
  • Escherichia coli* / chemistry
  • Escherichia coli* / genetics
  • Escherichia coli* / ultrastructure
  • Escherichia coli* / virology
  • Levivirus / chemistry
  • Levivirus / genetics
  • Levivirus / ultrastructure
  • Nanoparticles* / chemistry
  • Nanoparticles* / ultrastructure

Substances

  • DNA, Single-Stranded
  • DNA, Viral