Mechanism-Based Insights into Removing the Mutagenicity of Aromatic Amines by Small Structural Alterations

J Med Chem. 2021 Jun 24;64(12):8545-8563. doi: 10.1021/acs.jmedchem.1c00514. Epub 2021 Jun 10.

Abstract

Aromatic and heteroaromatic amines (ArNH2) are activated by cytochrome P450 monooxygenases, primarily CYP1A2, into reactive N-arylhydroxylamines that can lead to covalent adducts with DNA nucleobases. Hereby, we give hands-on mechanism-based guidelines to design mutagenicity-free ArNH2. The mechanism of N-hydroxylation of ArNH2 by CYP1A2 is investigated by density functional theory (DFT) calculations. Two putative pathways are considered, the radicaloid route that goes via the classical ferryl-oxo oxidant and an alternative anionic pathway through Fenton-like oxidation by ferriheme-bound H2O2. Results suggest that bioactivation of ArNH2 follows the anionic pathway. We demonstrate that H-bonding and/or geometric fit of ArNH2 to CYP1A2 as well as feasibility of both proton abstraction by the ferriheme-peroxo base and heterolytic cleavage of arylhydroxylamines render molecules mutagenic. Mutagenicity of ArNH2 can be removed by structural alterations that disrupt geometric and/or electrostatic fit to CYP1A2, decrease the acidity of the NH2 group, destabilize arylnitrenium ions, or disrupt their pre-covalent transition states with guanine.

MeSH terms

  • Amines / chemistry
  • Amines / metabolism*
  • Catalytic Domain
  • Crystallography, X-Ray
  • Cytochrome P-450 CYP1A2 / chemistry
  • Cytochrome P-450 CYP1A2 / metabolism*
  • Density Functional Theory
  • Discriminant Analysis
  • Heterocyclic Compounds / chemistry
  • Heterocyclic Compounds / metabolism*
  • Humans
  • Hydrocarbons, Aromatic / chemistry
  • Hydrocarbons, Aromatic / metabolism*
  • Hydroxylation
  • Least-Squares Analysis
  • Models, Chemical
  • Molecular Structure
  • Mutagens / chemistry
  • Mutagens / metabolism*
  • Protein Binding

Substances

  • Amines
  • Heterocyclic Compounds
  • Hydrocarbons, Aromatic
  • Mutagens
  • CYP1A2 protein, human
  • Cytochrome P-450 CYP1A2