Platelet-derived growth factor A chain: gene structure, chromosomal location, and basis for alternative mRNA splicing

Proc Natl Acad Sci U S A. 1988 Mar;85(5):1492-6. doi: 10.1073/pnas.85.5.1492.

Abstract

Genomic clones encoding the A chain of platelet-derived growth factor (PDGF) have been isolated. The gene contains seven exons spanning about 24 kilobases of DNA. The positions of intervening sequences closely match those of the related B-chain (c-sis) gene on chromosome 22. In situ hybridization was used to localize the PDGF A-chain gene to the distal portion of the short arm of chromosome 7 (7p21-p22). Within the (G + C)-rich 5' region, a single transcriptional start site was identified approximately equal to 36 base pairs downstream of a TATAA consensus promoter element. The three size classes of A-chain mRNA probably arise by selection of alternative poly(A) sites in exon 7, but only a single consensus AATAAA signal was identified in this region. Two functionally different A-chain precursors, which differ by the presence or absence of a basic C terminus, are generated as a result of alternative mRNA splicing events, which include or exclude exon 6. This and other structural features of the A-chain gene suggest that PDGF expression may be modulated at transcriptional and post-transcriptional levels.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Chromosome Mapping
  • Chromosomes, Human, Pair 7*
  • Cloning, Molecular
  • Exons
  • Gene Expression Regulation
  • Genes
  • Humans
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Platelet-Derived Growth Factor / genetics*
  • Poly A
  • RNA Splicing
  • RNA, Messenger / genetics
  • Transcription, Genetic

Substances

  • Platelet-Derived Growth Factor
  • RNA, Messenger
  • Poly A

Associated data

  • GENBANK/J03638
  • GENBANK/M19984
  • GENBANK/M19985
  • GENBANK/M19986
  • GENBANK/M19987
  • GENBANK/M19988
  • GENBANK/M19989
  • GENBANK/M21571