Bile proteome analysis by high-precision mass spectrometry to examine novel biomarkers of primary sclerosing cholangitis

J Hepatobiliary Pancreat Sci. 2023 Jul;30(7):914-923. doi: 10.1002/jhbp.1299. Epub 2022 Dec 29.

Abstract

Background: Primary sclerosing cholangitis (PSC) is a chronic inflammatory disease of unknown etiology that affects the intra- and extrahepatic bile ducts. The present study examined the utility of a bile proteome analysis using a high-sensitivity mass spectrometer to comprehensively screen for novel PSC biomarkers.

Methods: Bile endoscopically collected from patients with PSC, common bile duct stones, and biliary tract cancer were subjected to high-precision liquid chromatography/mass spectrometry. Some of the proteins specifically up-regulated in the bile of the PSC group were re-examined by an enzyme-linked immunosorbent assay.

Results: A total of 8094 proteins were successfully identified and 332 were specifically up-regulated in the PSC group. The bioinformatics analysis showed that proteins involved in the proliferation and activation of diverse inflammatory cells were up-regulated in the PSC group. A receiver operating characteristic curve analysis showed good area under the curve values for interleukin-8 and annexin A1 (ANXA1) (0.836 and 0.914, respectively). Immunostaining for ANXA1 revealed its strong expression in inflammatory cells infiltrating the peripheral biliary tract in PSC livers.

Conclusion: A bile proteome analysis is a useful tool for elucidating the pathogenesis of PSC and developing new diagnostic approaches. Therefore, ANXA1 has potential as a bile biomarker for PSC.

Keywords: bile biomarker; data independent acquisition; mass spectrometry; primary sclerosing cholangitis; proteomics.

MeSH terms

  • Bile
  • Biomarkers / metabolism
  • Cholangitis, Sclerosing* / diagnosis
  • Cholangitis, Sclerosing* / pathology
  • Humans
  • Mass Spectrometry
  • Proteome / analysis

Substances

  • Proteome
  • Biomarkers