B cell receptor repertoire analysis from autopsy samples of COVID-19 patients

Front Immunol. 2023 Feb 23:14:1034978. doi: 10.3389/fimmu.2023.1034978. eCollection 2023.

Abstract

Neutralizing antibodies against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are being developed world over. We investigated the possibility of producing artificial antibodies from the formalin fixation and paraffin-embedding (FFPE) lung lobes of a patient who died by coronavirus disease 2019 (COVID-19). The B-cell receptors repertoire in the lung tissue where SARS-CoV-2 was detected were considered to have highly sensitive virus-neutralizing activity, and artificial antibodies were produced by combining the most frequently detected heavy and light chains. Some neutralizing effects against the SARS-CoV-2 were observed, and mixing two different artificial antibodies had a higher tendency to suppress the virus. The neutralizing effects were similar to the immunoglobulin G obtained from healthy donors who had received a COVID-19 mRNA vaccine. Therefore, the use of FFPE lung tissue, which preserves the condition of direct virus sensitization, to generate artificial antibodies may be useful against future unknown infectious diseases.

Keywords: B cell receptors; COVID-19; lung; serum IgGs; single cell; vaccine intake.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Neutralizing
  • Autopsy
  • COVID-19 Vaccines
  • COVID-19*
  • Formaldehyde
  • Humans
  • Paraffin Embedding
  • Receptors, Antigen, B-Cell
  • SARS-CoV-2

Substances

  • COVID-19 Vaccines
  • Antibodies, Neutralizing
  • Formaldehyde
  • Receptors, Antigen, B-Cell

Grants and funding

This work was supported by JST CREST Grant Number JPMJCR5G3 (SH), Japan Agency for Medical Research and Development (AMED) Grant 20fk0108471h0001 (TTo), Grant-in-Aid from YOKOYAMA Foundation for Clinical Pharmacology (TTs), JSPS KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas program (Inflammation Cellular Sociology, FY2017-2021, KMa).