Computational Random Mutagenesis to Investigate RAS Mutant Signaling

Methods Mol Biol. 2023:2634:329-335. doi: 10.1007/978-1-0716-3008-2_15.

Abstract

This chapter describes how mathematical models can be used to investigate the possible range of behaviors for mutant forms of a protein. A mathematical model of the RAS signaling network that has previously been developed and applied to specific RAS mutants will be adapted for the process of computational random mutagenesis. By using this model to computationally investigate the range of RAS signaling outputs that would be anticipated over a wide range of the relevant parameter space, one can gain intuition about the types of behaviors that would be demonstrated by biological RAS mutants.

Keywords: Computational biology; Mutation; Systems biology.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Computational Biology
  • Mutagenesis
  • Mutation
  • Signal Transduction*
  • Systems Biology
  • ras Proteins* / genetics
  • ras Proteins* / metabolism

Substances

  • ras Proteins