MIR143HG promotes methylation of transcription factor HOXB7 promoter by recruiting methyltransferase DNMT1 to prevent the progression of colon cancer

FASEB J. 2024 Jan;38(1):e23378. doi: 10.1096/fj.202301060RRR.

Abstract

In recent years, accumulating evidence has demonstrated the role of long noncoding RNAs (lncRNAs) in colon cancer. We aim to investigate the role of MIR143HG, also known as CARMN (Cardiac mesoderm enhancer-associated noncoding RNA) in colon cancer and explore the related mechanisms. An RNAseq data analysis was performed to screen differentially expressed lncRNAs associated with colon cancer. Next, MIR143HG expression was quantified in colon cancer cells. Moreover, the contributory roles of MIR143HG in the progression of colon cancer with the involvement of DNMT1 and HOXB7 (Homeobox B7) were evaluated after restored MIR143HG or depleted HOXB7. Finally, the effects of MIR143HG were investigated in vivo by measuring tumor formation in nude mice. High-throughput transcriptome sequencing was employed to validate the specific mechanisms by which MIR143HG and HOXB7 affect tumor growth in vivo. MIR143HG was found to be poorly expressed, while HOXB7 was highly expressed in colon cancer. MIR143HG could promote HOXB7 methylation by recruiting DNMT1 to reduce HOXB7 expression. Upregulation of MIR143HG or downregulation of HOXB7 inhibited cell proliferation, invasion and migration and facilitated apoptosis in colon cancer cells so as to delay the progression of colon cancer. The same trend was identified in vivo. Our study provides evidence that restoration of MIR143HG suppressed the progression of colon cancer via downregulation of HOXB7 through DNMT1-mediated HOXB7 promoter methylation. Thus, MIR143HG may be a potential candidate for the treatment of colon cancer.

Keywords: DNMT1; methylation; Homeobox B7; MIR143HG; colon cancer; long noncoding RNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Colonic Neoplasms* / genetics
  • DNA (Cytosine-5-)-Methyltransferase 1* / metabolism
  • Homeodomain Proteins* / genetics
  • Humans
  • Methylation
  • Methyltransferases
  • Mice
  • Mice, Nude
  • Promoter Regions, Genetic
  • RNA, Long Noncoding* / genetics
  • Transcription Factors

Substances

  • DNA (Cytosine-5-)-Methyltransferase 1
  • DNMT1 protein, human
  • Homeodomain Proteins
  • HOXB7 protein, human
  • Methyltransferases
  • MIRN143 microRNA, human
  • RNA, Long Noncoding
  • Transcription Factors