Cold-chain free nucleic acid preservation using porous super-absorbent polymer (PSAP) beads to facilitate wastewater surveillance

Sci Total Environ. 2024 Aug 20:939:173468. doi: 10.1016/j.scitotenv.2024.173468. Epub 2024 May 22.

Abstract

The instability of viral targets including SARS-CoV-2 in sewage is an important challenge in wastewater monitoring projects. The unrecognized interruptions in the 'cold-chain' transport from the sample collection to RNA quantification in the laboratory may undermine the accurate quantification of the virus. In this study, bovine serum albumin (BSA)-modified porous superabsorbent polymer (PSAP) beads were applied to absorb raw sewage samples as a simple method for viral RNA preservation. The preservation efficiency for SARS-CoV-2 and pepper mild mottle virus (PMMoV) RNA were examined during storage for 14 days at 4 °C or room temperature against the control (no beads applied). While a non-significant difference was observed at 4 °C (∼80 % retention for both control and PSAP-treated sewage), the reduction of SARS-CoV-2 RNA concentrations was significantly lower in sewage retrieved from PSAP beads (25-40 % reduction) compared to control (>60 % reduction) at room temperature. On the other hand, the recovery of PMMoV, known for its high persistence in raw sewage, from PSAP beads or controls were consistently above 85 %, regardless of the storage temperature. Our results demonstrate the applicability of PSAP beads to wastewater-based epidemiology (WBE) projects for preservation of SARS-CoV-2 RNA in sewage, especially in remote settings with no refrigeration capabilities.

Keywords: PMMoV; Preservation; SARS-CoV-2; Viral RNA; WBE.

MeSH terms

  • COVID-19 / prevention & control
  • Environmental Monitoring / methods
  • Polymers*
  • Porosity
  • RNA, Viral* / analysis
  • SARS-CoV-2*
  • Sewage* / virology
  • Wastewater* / chemistry
  • Wastewater* / virology

Substances

  • Wastewater
  • Polymers
  • Sewage
  • RNA, Viral